A Server for The Identification of Functionally and Structurally Important Residues in Protein Sequences
Version 1.1

Note:

Results will be kept on the server for two months.
For further use please save data locally.

ConSeq: The Identification of Functionally and Structurally Important Residues in Protein Sequences
Berezin C., Glaser F., Rosenberg Y., Paz I., Pupko T., Fariselli P., Casadio R., and Ben-Tal N.
Bioinformatics. Vol. 20 1322-1324 (2004). PDF

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Method of calculating the amino acid conservation scores (obligatory)

Method:

Bayesian Max. Likelihood (ML)

Protein Sequence Paste here the sequence in FASTA format:

OR

User-Provided Multiple Sequence Alignment Enter your own MSA file: Query sequence name in MSA file:

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Send a link to the results by e-mail

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Advanced Options (Irrelevant when providing an external MSA) Multiply Align Sequences using MUSCLECLUSTALW Collect the Homologues from  SWISS-PROTUniProt Max. Number of Homologues No. of PSI-BLAST Iterations 1 2 3 4 5 PSI-BLAST E-value Cutoff

Model of substitution for proteins

JTT (default) mtREV (for mitochondrial proteins) cpREV (for chloroplasts proteins) WAG Dayhoff